CDS

Accession Number TCMCG066C04080
gbkey CDS
Protein Id XP_034577641.1
Location complement(join(40020697..40020876,40021026..40021161,40021253..40021488,40021744..40024638,40024716..40024892,40025947..40026052,40026710..40026789,40027302..40027462,40027555..40027635,40027829..40027844))
Gene LOC117841395
GeneID 117841395
Organism Setaria viridis

Protein

Length 1355aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034721750.1
Definition serine/threonine-protein kinase VPS15 isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category T
Description WD domain, G-beta repeat
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K08333        [VIEW IN KEGG]
EC 2.7.11.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04136        [VIEW IN KEGG]
ko04138        [VIEW IN KEGG]
ko04140        [VIEW IN KEGG]
ko04371        [VIEW IN KEGG]
map04136        [VIEW IN KEGG]
map04138        [VIEW IN KEGG]
map04140        [VIEW IN KEGG]
map04371        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000011        [VIEW IN EMBL-EBI]
GO:0000151        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0004674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0005942        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006623        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009846        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010008        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019898        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030242        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031461        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032182        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032507        [VIEW IN EMBL-EBI]
GO:0032784        [VIEW IN EMBL-EBI]
GO:0032786        [VIEW IN EMBL-EBI]
GO:0032968        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034067        [VIEW IN EMBL-EBI]
GO:0034243        [VIEW IN EMBL-EBI]
GO:0034271        [VIEW IN EMBL-EBI]
GO:0034272        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0035032        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043130        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044232        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0045053        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045185        [VIEW IN EMBL-EBI]
GO:0045324        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048015        [VIEW IN EMBL-EBI]
GO:0048017        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048308        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051235        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051651        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071561        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072665        [VIEW IN EMBL-EBI]
GO:0072666        [VIEW IN EMBL-EBI]
GO:0080008        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0120095        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTGCTTTTCAGAGATGGTTGCCGACTTAGATCATTTGGTTGTGCAGTTAATCCATGCAGTGGAGCAGAGCCATAGTAAAGGAGTTTGCCATGGTGACATAAAATGTGAGAACGTGCTCGTTACTTCTTGGAATTGGCTATATCTTGCGGACTTCGCGTCTTTCAAGCCAACTTACATCCCATATGATGATCCATCTGATTATTCATTCTACTTCGACACTGGAGGAAGGCGAAGATGCTATCTAGCACCTGAAAGATTCTACGAACATGGTGGGGAGTCCCAAGTTGCAGCTGATGCACCCCTGCAACCATCAATGGATATATTTTCTCTTGGGTGCGTTCTTGCTGAACTTTTCCTTGACGGCGTGGCACTTTTTGAGTTTTCAAACCTTCTGTCTTATCGGCGTGGTCAATATGACCCGATGCTTCTTCTACACAAGATACAAGATACTGGTATTCGTGACATGATACTTCACATGATCCAGTTGGACCCCCAAAAAAGGCTACCGTGTCGAAGCTATCTACAAAAATACGAATCTGTTGTGTTCCCAGTTTATTTTTCAAACTTTCTGCACAAGTTCTTCTCGGATATTGTTCCACTTGACTCAGATGCCAGGGTTGAGAAGACTCAAGACAATTTTGAAAAGATACTTGAAATAATGATGGACAGCTCAACGATTGAACAGATCGGGAGATGTACATTGTCTGAGCATAGTGAACCATCTGGGAGAAAAGGCACAGGAGGGCAAATTTTAAACTCGCCAGGAGATTCTAAAAAGAGCACATCAGTTAAGAAAAATGCTCTTGTAGACCATCAACAGATTGCTGGAGATATCAATTTCCTCCTCAAAGAAGTGGAGAACAGGAGCAACAGCACAAGCACAAAGATAACAAAAGACATGGACCAGGACCATATTCGGTCCTCACAGCTGGTTAATCCAGCAGGAAGGGGAACAGGAAGTGGTTTGACGACCCGGAACAATGTTGTATCCCATGTGCAGAAGATCTCAAAGAGTAATTTATGTTCCTTGGTAGCTGGTTATGATGGCCAATCAGATACCTATAGCTTTGACATTTTTCAACAGATAGACTCCAAGGAGAGCTGTGAAGGCATGGTCTTGCTTGCCTCATTACTCTGCTCATGCATACGCAGTGTGAAAAAACCTGAGCTAAGAAGGGCCAGTCTCATTCTTCTGAAGTTTTCGTCCACATACATAGATGATGACAATCGCTTACAGCTAGTGGTTCCCTATGTGATTGCGATGCTTTCAGATCCGGCTGCCATTGTCCGCTGCGCTGCTTTGGAAACCTTATGTGATGTCCTCTGTCTTGTGCAAGACTTCCCTATCAGTGATGCTGTTATATTCCCTGAGTACATCCTCCCAATGCTCTCTTTGCTTCCTGATGATACAGAGGAGAGTGTTAGAGTTTGCTATGCTAGCAATATTCATAAGCTGGCTTTAACAGCTTATAGGTTCCTACTTCGTTCTCGTAGCATAGCCGATATTGGACCTCTGGATGAATCAGTGGTAGCTCCCAGATCACAGTCTGCAGATTCACCAGCAAAGAAGCAAGATCAATTTTATGCCCAGCTTGCAGAACTGAGGAAAAATATTTATGAAATAGTGCAAGATTTGGCTATGGGACAAAAGCAGACACCTAATGTCCGCAGAGCTCTTCTGCAGGATATAGGTTATTTGTGTTACTTCTTTGGGCACAAGCAAAGTAATGATTTTCTTCTTCCTATACTTCCGGCATTTCTAAATGACCATGACGAGCAGCTCCGTGCAGTTTTCTTTGGCCAGATTGTCTTTGTTTGCTATTTCATTGGTTCAAGGAGCGTTGAGGAATATCTTTTGCCATATCTTGAACAGGCACTAAGTGATGGTATGGAGGCTGTCCTTGTAAATGCACTTGATTGCTTGACCATGATGTGCAAAAGTGGTTATTTGAGGAAAAGAGTAATTGTTGGTCTATTGGGAAAGGTTCTCCCCCTGCTTCGGTATCCAATCAATTGGGTTAAACGGTCTGCTGTAAGATTTGTTGCTGCTTGCAGTGAGAGCCTAGGGGCTGTAGATACTTATGTGTACCTTTCTCCTCATCTAAGGCAGTTCCTACACAGGGAGCCACCTTCATTGTCCTCTGAACCTGCTCTTCTTTCATGCCTTAAGCCTCCACTGCCAAAATCGATCTTCTACCAAGCTTTAGAGGATGCTCAGGACATGGGAGACATTTTACTGAAGGGTGGTGGCAAGAAAGAACTGACAGTACTTGGTGGAAGATACCCTGGTATAGCGCAAAGTGGATCCTCAATCAATCTTGAAGATGTTGCGCGATTGAAAGGCCCTAATATTTCCAGCAACATGCCTTTTGATGTCAAAGATTCAGTTTCTTCTGACAAATCATTATATTCTGGTTTTGCACTACATGCATCTGCTGGGAATAGTTCCTTTTATGACGGCTTATCTAAAGGAATACCATCATATTCTGTTTGTACCGATAAGCGAGGTTTAGGAGAAACACAGCCGCTCCCTGATTCTTCAGTGTATAAAGCATCAATAAGGCTACCTTGGTTGGAACCCAACCGCCCAGGCGTGCATACTAGAGATGATTATTTCAGTAGCAAGCGGCGAGAGTTAAGCATAAATGATTCTATCAAGAGCAGTTCCTCTTTGCAAGGGGATAGCATTCCAAACTCTGATACTGGAGGATTGCCGTCCTTCTCCAGATCAGCAGTGAACTTGGAGACTGGATGGAAGCCTCGTGGAATACTAGTGGCACATCTCCAGGAGCATCGCTTGTCTGTCAATGATATCGCCGTATCAAATGATAATACCTTTTTTGTGACTGCTTCTGACGACTCAAGTATCAAGATATGGGATACAAGAAAGTTGGAAAAGGACATTGCCTTCAGATCCAGGTTAACGTACAGCATGGGTACTAGCCGAGCTCTTTGTACGACAATGGTTCGTGGTACTTCACAGGTGGCTGTCGGTGCAAGCGATGGAACACTGCACTTGTTTTCTGTTGATTGTGCACGCGGCGTTGGGAGTGTTGTGGAAAGGTATTCTGGAATTGTTGATGTAAAAAGGAATGATATTAAAGAAGGTGCAATTCTAAGTGCTGTAAATTGTTCAAGCGACAGCTTTAGCCCAACTGTCCTTTTCAGCACTGAACATTGTGGCATCCATAAATGGGATACAAGGACCAACTCAGAATCTTGGTCATTTAAATCCTCACCGGAGGAGGGCTATATATCCGCACTTGTTGTTGGCCAGTGTGGAAATTGGTTCATCTCAGGTTCTTCACGAGGTGCCCTTACCCTGTGGGATAATAGGTTTTTGCTGCCTGTTAACTCGTGGTACTATTCAACAGTAAGCCCTATAGAGAAATTGTGCTTGCTTATACCTCCACCAAGTTCAATATCTTCTGCTGGAAGGCCATTGGTTTTTGTTGCCGCCGGCTGCAACGAAGTTTCCCTATGGAATGCTGAGAATGGAAGCTGCCACCAGGTGTTTAGAACGGCAAGCACTGAGAATGAAGCTGTGATGCCAAAGACACCATCAAGACCTCTTAACAAGTCAACTACCAAAGATGTAAGACGACCAGGCAATTATAAGTACAGAATTGATGAATTGAACGACCCACCTGTACGCCATCCAGGCATACGCTCTCTGCTTCCCTTACCTGGCGGTGATCTATTGACTGGAGGAACAGACTTGAAAATTCGTTATTGGGATCAAGCCAGACCTGAGCAAAGCTTCTGTATCGCTGGTCCCTCGGCCAAAGAAGTCCGTTCGGCAAAAGGAGATATTTTGGAGAAAGCAGTTGGAAACAATGAGTGTTATGATATAAGATCCAGTTTTGGAGTACAAGTCGTTCAGGAAATGTACAAGCAAACAACCACGGTGTCCGGTTTGACACCCAAGACACAGCTCGCTTTGGCTGCTGCAGACTCCGCTGGGTGCCACCGTGATACTATACTTGCATTGGCATCCTTCAACTTGTCAAGCCAGAGGTTGATATCAGCCAGCAGAGATGGTGCCGTCAAAGTGTGGAAATAG
Protein:  
MACFSEMVADLDHLVVQLIHAVEQSHSKGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDDPSDYSFYFDTGGRRRCYLAPERFYEHGGESQVAADAPLQPSMDIFSLGCVLAELFLDGVALFEFSNLLSYRRGQYDPMLLLHKIQDTGIRDMILHMIQLDPQKRLPCRSYLQKYESVVFPVYFSNFLHKFFSDIVPLDSDARVEKTQDNFEKILEIMMDSSTIEQIGRCTLSEHSEPSGRKGTGGQILNSPGDSKKSTSVKKNALVDHQQIAGDINFLLKEVENRSNSTSTKITKDMDQDHIRSSQLVNPAGRGTGSGLTTRNNVVSHVQKISKSNLCSLVAGYDGQSDTYSFDIFQQIDSKESCEGMVLLASLLCSCIRSVKKPELRRASLILLKFSSTYIDDDNRLQLVVPYVIAMLSDPAAIVRCAALETLCDVLCLVQDFPISDAVIFPEYILPMLSLLPDDTEESVRVCYASNIHKLALTAYRFLLRSRSIADIGPLDESVVAPRSQSADSPAKKQDQFYAQLAELRKNIYEIVQDLAMGQKQTPNVRRALLQDIGYLCYFFGHKQSNDFLLPILPAFLNDHDEQLRAVFFGQIVFVCYFIGSRSVEEYLLPYLEQALSDGMEAVLVNALDCLTMMCKSGYLRKRVIVGLLGKVLPLLRYPINWVKRSAVRFVAACSESLGAVDTYVYLSPHLRQFLHREPPSLSSEPALLSCLKPPLPKSIFYQALEDAQDMGDILLKGGGKKELTVLGGRYPGIAQSGSSINLEDVARLKGPNISSNMPFDVKDSVSSDKSLYSGFALHASAGNSSFYDGLSKGIPSYSVCTDKRGLGETQPLPDSSVYKASIRLPWLEPNRPGVHTRDDYFSSKRRELSINDSIKSSSSLQGDSIPNSDTGGLPSFSRSAVNLETGWKPRGILVAHLQEHRLSVNDIAVSNDNTFFVTASDDSSIKIWDTRKLEKDIAFRSRLTYSMGTSRALCTTMVRGTSQVAVGASDGTLHLFSVDCARGVGSVVERYSGIVDVKRNDIKEGAILSAVNCSSDSFSPTVLFSTEHCGIHKWDTRTNSESWSFKSSPEEGYISALVVGQCGNWFISGSSRGALTLWDNRFLLPVNSWYYSTVSPIEKLCLLIPPPSSISSAGRPLVFVAAGCNEVSLWNAENGSCHQVFRTASTENEAVMPKTPSRPLNKSTTKDVRRPGNYKYRIDELNDPPVRHPGIRSLLPLPGGDLLTGGTDLKIRYWDQARPEQSFCIAGPSAKEVRSAKGDILEKAVGNNECYDIRSSFGVQVVQEMYKQTTTVSGLTPKTQLALAAADSAGCHRDTILALASFNLSSQRLISASRDGAVKVWK